Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807501.1_cds_XP_016494853.1_9230
CDS Infomation

[gene=LOC107814039] [db_xref=GeneID:107814039] [protein=suppressor of mec-8 and unc-52 protein homolog 2-like] [protein_id=XP_016494853.1] [location=complement(join(10253..10522,10813..11187,11435..11775,12330..12453,12539..12607,13189..13278,13379..13427,13818..13932,14203..14252,14740..14880,15055..15104))] [gbkey=CDS]
Sequence

ATGTCTTCCTCCAAAAGAAATCACAAGGAAAAGATAATTCGTCACAAGAAAGAAGAGAAG
ACGGAAGAACCGGAACTACCAAAGTACAGAGACAGAGCTAAAGAAAGAAGAGAAGATCAA
AATCCGGATTATGAACTCACTGAATTAGGCGCTTTTCATGCTGTCGCTCCTCCCGGGAAT
GTTGATCTTCTGTCTGCTGATGCTCACAAATTATCTATTGAGAAGAGCAAGTATCTTGGA
GGTGATGTGGAACACACACATTTAGTTAAAGGGTTAGATTATGCTTTACTTCACAAAGTG
AGAAGTGAAATAGATAAGAAGCCAGATGCTGGAGATGAGTATGAAGGAAAACCTAGAGCA
TCAAAGGAAGATCAGCAGATGTCATTCCGTACTGCAACTGCCAAGTCAGTATACCAATGG
ATGATCAAGCCTCAGACTGTTATAAAGACCAATGAAATGTTTCTTCCTGGACGGATGTCT
TTTATTTTTAATATGGAGAGTGGATACAACACTGATATTCCGACCACTCTACACAGGAGC
AAAGCTGACTGTCCAGTCCCTGAGGAAATGGTTACAGTCAGTGTTGATGGTTCTGTTCTA
GACCGAATAGCTAAAATCATGTCCTATCTCCGCCTTGGATCATCAGGAAAAGTTCTCAAG
AAGAAGAAGAAGGAAAAAGGTGGCAAAGGGAAGACTGTTATATCCAATGGTTACGACGAA
TTATCGAAGTCTGATGCATCAAAGAGCCAAAATGATACAGAAACTGTGCCTCAATCTGCA
CCGCTTCCTAAAAAGAACCATTTAGAAAGAAAAGAGAATCAGGGACCTGCTGCAGCTAGA
GTTGAAGAGGAAGATATCTTCGTAGGGGAAGGTGTTGACTACTCTATTCCTGCTGGAGAT
ATTGGTCAAAGCCCTGTATCAGAGGATATGGAAGAATCTCCTCGAAACAAAGAGAGGACC
TCATATTTCAGTGAACCTGCCTATGGCCCAGTCCCGCCATCCGAGCCTTCTCATGATTGG
CAACAGGCGAATGGATATGATGCAATGCAAGCACAAGCGCTAGCTGGTGTTTACCAACCA
GAATGGCAAGATTATCAGTATTCTGAGCAGCTGGCTTACCCCGAGCAATATCTCCAGCAG
AATTATGATATGCAAGCTGATGCTGGCGTTCTACAGGATCCACGATTTATGAGTCAAGAA
GAAAAGGATAGAGGGCTAGGTTCAGTATTCAAGAGGGATGATCAAAGGCTTCAACAGCTG
AGAGAGAGAGATGCCCGAGAGAAGGATCCTAATTTCATTTCTGAAAGCTATTCTGAGTGC
TATCCTGGTTACCAAGAGTACAATCGTGAGATTGTTGACAGTGATGATGAAGCTGATTTG
TCAAAAATGGACATGGGTGGACGTGCAAAGGGTCGGCTTCATCGATGGGACTTTGAGACA
GAGGAGGAGTGGGCAACGTACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAG
TTTGGAGTGAAAATGCAGGATGGTAGGAAGACCAGAAAACAAAACAAAGAGCAGAAACTT
ACCAATGAGCTGCATAAGATAAACAAAATACTCACCAGAAAGAAGACGGAGAAGGAGAAA
GGTGAAATGCTTGAGGACGGTGAAATACAACCTGGAAAGAAGCTGCGTGTATAA

Peptide Sequence

PEP ID

XP_016494853.1
PEP Infomation

PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2-like [Nicotiana tabacum]
Sequence

MSSSKRNHKEKIIRHKKEEKTEEPELPKYRDRAKERREDQNPDYELTELGAFHAVAPPGN
VDLLSADAHKLSIEKSKYLGGDVEHTHLVKGLDYALLHKVRSEIDKKPDAGDEYEGKPRA
SKEDQQMSFRTATAKSVYQWMIKPQTVIKTNEMFLPGRMSFIFNMESGYNTDIPTTLHRS
KADCPVPEEMVTVSVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKEKGGKGKTVISNGYDE
LSKSDASKSQNDTETVPQSAPLPKKNHLERKENQGPAAARVEEEDIFVGEGVDYSIPAGD
IGQSPVSEDMEESPRNKERTSYFSEPAYGPVPPSEPSHDWQQANGYDAMQAQALAGVYQP
EWQDYQYSEQLAYPEQYLQQNYDMQADAGVLQDPRFMSQEEKDRGLGSVFKRDDQRLQQL
RERDAREKDPNFISESYSECYPGYQEYNREIVDSDDEADLSKMDMGGRAKGRLHRWDFET
EEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKEQKLTNELHKINKILTRKKTEKEK
GEMLEDGEIQPGKKLRV

Transcript Sequence

Gene sequence data has not been registered.